The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR184
  5. abs-miR184

Accession: B00909101

Entry

ID: abs-miR184
Alias: F3064.L000071.A25
Sequence: UGGACGGAGAACUGAUAAGGG
Description: microRNA mir-184 predicted
Species: 重齿当归  Species latin name: Angelica biserrata
TCM Name: Duhuo(独活)  
TCM Resource (Sample number): 独活(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR184a; Bsr-miR184a; abs-miR184; acr-miR184a; act-miR184a; bca-miR184a; ccs-miR184a; cmd-miR184a; cof-miR184a; cor-miR184a; cri-miR184; csp-miR184a; fmu-miR184a; gel-miR184a; ljc-miR184a; poe-miR184a; sba-miR184a; tfa-miR184a; tki-miR184a; tmo-miR184a; zof-miR184a;

Rfam Alignments

>> mir-184  microRNA mir-184
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0017   21.0   0.0  cm       53       73 ~~           1          21 + ~~ 1.00 5'&3' 0.52
                                                              ??? ??????? ?????????       NC
                                                        ~~~~~~>>>->>>>>>>->>>>>>>>>~~~~~~ CS
                                             mir-184  1 <[52]*uGGACgGAgAACUGAUAAGGg*[11]> 84
                                                              UGGACGGAGAACUGAUAAGGG
                                         zof-miR184a  1 <[ 0]*UGGACGGAGAACUGAUAAGGG*[ 0]> 21
                                                        ......*********************...... PP

Targets

Predicted by TargetFinder

NM_001363613 ;   NM_003799 ;   NM_007045 ;   NM_018050 ;   NM_194429 ;  

Predicted by TAPIR

NM_001363613 ;   NM_003799 ;   NM_007045 ;   NM_018050 ;   NM_018129 ;   NM_194429 ;   NR_033833 ;