The Bencao (Herbal) Database(本草数据库)
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sRNA_Target(sRNA靶基因)
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OmicsAtlas
TranscriptomeAtlas
miRNA Atlas
miR276
aox-miR276
Accession:
B06764229
Entry
Homologs
Rfam Alignments
Targets
Entry
ID:
aox-miR276
Alias:
F68.M000005.B25*
Sequence:
UAGGAACUUCAUACCGUGCUCU
Description:
microRNA mir-276 predicted
Species:
益智
  Species latin name:
Alpinia oxyphylla
TCM Name:
Yizhi(益智)
TCM Resource (Sample number):
益智(1)
Predicted by
Mirnovo
:
-
Evidence support:
Infernal
Experimental status:
Yes
Homologs
miRBase Homologs
None
Bencao Homologs
Bbj-miR276
;
Bjl-miR276a
;
Bsr-miR276
;
Bswzz-miR276
;
Btmz-miR276
;
aan-miR276
;
aar-miR276
;
aco-miR276
;
acr-miR276
;
act-miR276
;
ada-miR276
;
ade-miR276
;
aer-miR276
;
aeu-miR276
;
aha-miR276
;
aju-miR276
;
ala-miR276
;
amc-miR276
;
aox-miR276
;
apl-miR276
;
aqi-miR276
;
ath-miR276a
;
bca-miR276a
;
bci-miR276
;
bhi-miR276
;
bmj-miR276
;
cab-miR276
;
car-miR276a
;
cas-miR276
;
cba-miR276
;
cci-miR276
;
cco-miR276a
;
ccs-miR276
;
cde-miR276
;
cfe-miR276a
;
cga-miR276
;
che-miR276
;
cid-miR276a
;
cit-miR276
;
cja-miR276a
;
clo-miR276
;
cma-miR276
;
cmd-miR276a
;
cmj-miR276
;
cmn-miR276
;
cmo-miR276a
;
cof-miR276
;
cpe-miR276
;
cph-miR276
;
cri-miR276a
;
cso-miR276
;
csp-miR276a
;
csu-miR276a
;
das-miR276
;
dst-miR276
;
efo-miR276
;
ehu-miR276
;
eja-miR276
;
epr-miR276
;
esn-miR276
;
est-miR276
;
fmu-miR276
;
gbi-miR276
;
gel-miR276a
;
gja-miR276
;
gmc-miR276
;
gur-miR276
;
hcr-miR276
;
hmu-miR276
;
hoc-miR276
;
hof-miR276
;
hvu-miR276
;
iba-miR276
;
ija-miR276
;
ini-miR276
;
kga-miR276
;
lch-miR276
;
lcr-miR276a
;
lfo-miR276
;
ljc-miR276a
;
lji-miR276
;
ljp-miR276
;
llc-miR276
;
llu-miR276a
;
mca-miR276
;
mda-miR276
;
nca-miR276
;
nja-miR276
;
nnu-miR276
;
nsc-miR276
;
nte-miR276
;
ofi-miR276a
;
pas-miR276
;
pav-miR276
;
pch-miR276
;
pci-miR276
;
pcl-miR276
;
pcn-miR276
;
pfr-miR276
;
pgi-miR276
;
pla-miR276
;
pmu-miR276
;
poe-miR276a
;
por-miR276
;
ppr-miR276
;
rcd-miR276
;
rch-miR276
;
rcr-miR276
;
rja-miR276
;
run-miR276
;
sad-miR276
;
sar-miR276
;
sba-miR276
;
sca-miR276
;
sch-miR276
;
sdf-miR276
;
sdi-miR276
;
sgi-miR276
;
sgl-miR276
;
sjp-miR276a
;
spa-miR276
;
spo-miR276
;
ssa-miR276
;
sse-miR276
;
ssu-miR276
;
tch-miR276
;
tci-miR276
;
tfa-miR276a
;
tja-miR276
;
tki-miR276
;
tmo-miR276
;
twi-miR276
;
vtr-miR276
;
zof-miR276a
;
Rfam Alignments
>> mir-276  microRNA mir-276
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0065   17.6   0.0  cm       57       78 ~~           1          22 + ~~ 1.00 5'&3' 0.45
                                                              ????????  ????? ????         NC
                                                        ~~~~~~>>>>>>>>-->>>>>->>>>--~~~~~~ CS
                                             mir-276  1 <[56]*UAGGAACUUcAUACCGuGCUCU*[16]> 94
                                                              UAGGAACUUCAUACCGUGCUCU
                                         zof-miR276a  1 <[ 0]*UAGGAACUUCAUACCGUGCUCU*[ 0]> 22
                                                        ......**********************...... PP
Targets
Predicted by TargetFinder
NM_001173513
;  
NM_052883
;  
NM_198514
;  
Predicted by TAPIR
NM_001173513
;  
NM_052883
;  
NM_198514
;