The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR168
  5. aha-miR168e

Accession: B05025949

Entry

ID: aha-miR168e
Alias: F13942.L000041.A3D*
Sequence: CCCGCCUUGCACCAACUGAAU
Description: MIR168 putative
Species: 海南山姜  Species latin name: Alpinia hainanensis
TCM Name: Caodoukou(草豆蔻)  
TCM Resource (Sample number): 草豆蔻(1)
Predicted by Mirnovo: -
Evidence support: Mirbase|infernal
Experimental status: Not yet

Homologs

miRBase Homologs

vca-miR168b-3p;

Bencao Homologs

None

Rfam Alignments

>> MIR168  microRNA MIR168
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0055   16.9   0.0  cm       96      116 ~~           1          21 + ~~ 1.00 5'&3' 0.57
                                                                   ???? ??????????  ????       NC
                                                             ~~~~~~>>>>->>>>>>>>>>-->>>>~~~~~~ CS
                                                  MIR168   1 <[95]*CCCGCCUUGCAUCAAcUGAAu*[17]> 133
                                                                   CCCGCCUUGCA CAACUGAAU
                                             aha-miR168e   1 <[ 0]*CCCGCCUUGCACCAACUGAAU*[ 0]> 21
                                                             ......*********************...... PP

Targets

Predicted by TargetFinder

NM_001291965 ;   NM_006646 ;  

Predicted by TAPIR

NM_001897 ;